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   LOCUS       NC_009487            2906700 bp    DNA     circular BCT 08-AUG-2007
   DEFINITION  Staphylococcus aureus subsp. aureus JH9, complete genome.
   ACCESSION   NC_009487
   VERSION     NC_009487.1  GI:148266447
   KEYWORDS    .
   SOURCE      Staphylococcus aureus subsp. aureus JH9
     ORGANISM  Staphylococcus aureus subsp. aureus JH9
               Bacteria; Firmicutes; Bacillales; Staphylococcus.
   REFERENCE   1  (bases 1 to 2906700)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
               del Rio,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
               Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
               Hauser,L., Kyrpides,N., Kim,E., Tomasz,A. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Complete sequence of chromosome of Staphylococcus aureus subsp.
               aureus JH9
     JOURNAL   Unpublished
   REFERENCE   2  (bases 1 to 2906700)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (23-MAY-2007) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2906700)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
               del Rio,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
               Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
               Hauser,L., Kyrpides,N., Kim,E., Tomasz,A. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Direct Submission
     JOURNAL   Submitted (14-MAY-2007) US DOE Joint Genome Institute, 2800
               Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000703.
               URL -- http://www.jgi.doe.gov
               JGI Project ID: 4001073
               Source DNA and bacteria available from Alexander Tomasz
               (tomasz@rockefeller.edu)
               Contacts: Alexander Tomasz (tomasz@rockefeller.edu)
                         Paul Richardson (microbes@cuba.jgi-psf.org)
               Quality assurance done by JGI-Stanford
               Annotation done by JGI-ORNL and JGI-PGF
               Finishing done by JGI-LLNL
               Finished microbial genomes have been curated to close all gaps with
               greater than 98% coverage of at least two independent clones. Each
               base pair has a minimum q (quality) value of 30 and the total error
               rate is less than one per 50000.
               The JGI and collaborators endorse the principles for the
               distribution and use of large scale sequencing data adopted by the
               larger genome sequencing community and urge users of this data to
               follow them. It is our intention to publish the work of this
               project in a timely fashion and we welcome collaborative
               interaction on the project and analysis.
               (http://www.genome.gov/page.cfm?pageID=10506376).
               COMPLETENESS: full length.


Расположение РНК[]

Начало Конец Направление Длина PID Ген COG Комментарий
24215 24289 + 75 148266447 SaurJH9_R0001 - 04 Glu tRNA
24297 24369 + 73 148266447 SaurJH9_R0002 - 06 Asp tRNA
532173 532265 + 93 148266447 SaurJH9_R0003 - 08 Ser tRNA
536798 536898 + 101 148266447 SaurJH9_R0004 - SRP RNA; RNA component of signal recognitionparticle
541421 542975 + 1555 148266447 SaurJH9_R0005 - 16S ribosomal RNA
543340 546262 + 2923 148266447 SaurJH9_R0006 - 23S ribosomal RNA
546334 546452 + 119 148266447 SaurJH9_R0007 - 5S ribosomal RNA
584769 584884 + 116 148266447 SaurJH9_R0008 - 5S ribosomal RNA
584894 584969 + 76 148266447 SaurJH9_R0009 - 13 Val tRNA
584986 585061 + 76 148266447 SaurJH9_R0010 - 12 Thr tRNA
585068 585140 + 73 148266447 SaurJH9_R0011 - 10 Lys tRNA
585174 585248 + 75 148266447 SaurJH9_R0012 - 01 Gly tRNA
585256 585344 + 89 148266447 SaurJH9_R0013 - 15 Leu tRNA
585350 585426 + 77 148266447 SaurJH9_R0014 - 11 Arg tRNA
585447 585520 + 74 148266447 SaurJH9_R0015 - 03 Pro tRNA
585544 585619 + 76 148266447 SaurJH9_R0016 - 02 Ala tRNA
585740 587294 + 1555 148266447 SaurJH9_R0017 - 16S ribosomal RNA
587764 590686 + 2923 148266447 SaurJH9_R0018 - 23S ribosomal RNA
590758 590876 + 119 148266447 SaurJH9_R0019 - 5S ribosomal RNA
591085 592639 + 1555 148266447 SaurJH9_R0020 - 16S ribosomal RNA
593004 595926 + 2923 148266447 SaurJH9_R0021 - 23S ribosomal RNA
596001 596114 + 114 148266447 SaurJH9_R0022 - 5S ribosomal RNA
869364 869435 - 72 148266447 SaurJH9_R0023 - 11 Arg tRNA
885621 885979 + 359 148266447 SaurJH9_R0024 - tmRNA
1127273 1127361 - 89 148266447 SaurJH9_R0025 - 08 Ser tRNA
1127364 1127438 - 75 148266447 SaurJH9_R0026 - 07 Asn tRNA
1276772 1276845 - 74 148266447 SaurJH9_R0027 - 11 Arg tRNA
1608572 1608919 + 348 148266447 SaurJH9_R0028 - RNAseP RNA
2004094 2004182 - 89 148266447 SaurJH9_R0029 - 08 Ser tRNA
2004237 2004308 - 72 148266447 SaurJH9_R0030 - 04 Glu tRNA
2004310 2004384 - 75 148266447 SaurJH9_R0031 - 07 Asn tRNA
2004402 2004475 - 74 148266447 SaurJH9_R0032 - 01 Gly tRNA
2004491 2004566 - 76 148266447 SaurJH9_R0033 - 09 His tRNA
2004580 2004652 - 73 148266447 SaurJH9_R0034 - 17 Phe tRNA
2004669 2004744 - 76 148266447 SaurJH9_R0035 - 06 Asp tRNA
2004766 2004839 - 74 148266447 SaurJH9_R0036 - 16 Met tRNA
2039984 2040067 - 84 148266447 SaurJH9_R0037 - 15 Leu tRNA
2040106 2040180 - 75 148266447 SaurJH9_R0038 - Xaa tRNA
2040284 2040358 - 75 148266447 SaurJH9_R0039 - 01 Gly tRNA
2040366 2040439 - 74 148266447 SaurJH9_R0040 - 19 Cys tRNA
2040445 2040516 - 72 148266447 SaurJH9_R0041 - 05 Gln tRNA
2040528 2040600 - 73 148266447 SaurJH9_R0042 - 09 His tRNA
2040603 2040676 - 74 148266447 SaurJH9_R0043 - 20 Trp tRNA
2040692 2040773 - 82 148266447 SaurJH9_R0044 - 18 Tyr tRNA
2040779 2040854 - 76 148266447 SaurJH9_R0045 - 12 Thr tRNA
2040862 2040934 - 73 148266447 SaurJH9_R0046 - 17 Phe tRNA
2040953 2041028 - 76 148266447 SaurJH9_R0047 - 06 Asp tRNA
2041050 2041123 - 74 148266447 SaurJH9_R0048 - 16 Met tRNA
2041138 2041230 - 93 148266447 SaurJH9_R0049 - 08 Ser tRNA
2041269 2041344 - 76 148266447 SaurJH9_R0050 - 06 Asp tRNA
2041355 2041444 - 90 148266447 SaurJH9_R0051 - 08 Ser tRNA
2041454 2041527 - 74 148266447 SaurJH9_R0052 - 16 Met tRNA
2041553 2041629 - 77 148266447 SaurJH9_R0053 - 16 Met tRNA
2041651 2041726 - 76 148266447 SaurJH9_R0054 - 02 Ala tRNA
2041744 2041817 - 74 148266447 SaurJH9_R0055 - 03 Pro tRNA
2041827 2041900 - 74 148266447 SaurJH9_R0056 - 11 Arg tRNA
2041919 2042007 - 89 148266447 SaurJH9_R0057 - 15 Leu tRNA
2042018 2042092 - 75 148266447 SaurJH9_R0058 - 01 Gly tRNA
2042096 2042177 - 82 148266447 SaurJH9_R0059 - 15 Leu tRNA
2042181 2042256 - 76 148266447 SaurJH9_R0060 - 10 Lys tRNA
2042262 2042337 - 76 148266447 SaurJH9_R0061 - 12 Thr tRNA
2042354 2042429 - 76 148266447 SaurJH9_R0062 - 13 Val tRNA
2042440 2042553 - 114 148266447 SaurJH9_R0063 - 5S ribosomal RNA
2042628 2045550 - 2923 148266447 SaurJH9_R0064 - 23S ribosomal RNA
2045764 2045839 - 76 148266447 SaurJH9_R0065 - 02 Ala tRNA
2045858 2045934 - 77 148266447 SaurJH9_R0066 - 14 Ile tRNA
2046017 2047578 - 1562 148266447 SaurJH9_R0067 - 16S ribosomal RNA
2215389 2215502 - 114 148266447 SaurJH9_R0068 - 5S ribosomal RNA
2215577 2218499 - 2923 148266447 SaurJH9_R0069 - 23S ribosomal RNA
2218962 2220523 - 1562 148266447 SaurJH9_R0070 - 16S ribosomal RNA
2220641 2220714 - 74 148266447 SaurJH9_R0071 - 01 Gly tRNA
2220733 2220818 - 86 148266447 SaurJH9_R0072 - 15 Leu tRNA
2329960 2330035 - 76 148266447 SaurJH9_R0073 - 10 Lys tRNA
2330039 2330113 - 75 148266447 SaurJH9_R0074 - 05 Gln tRNA
2330123 2330206 - 84 148266447 SaurJH9_R0075 - 18 Tyr tRNA
2330236 2330311 - 76 148266447 SaurJH9_R0076 - 13 Val tRNA
2330319 2330390 - 72 148266447 SaurJH9_R0077 - 04 Glu tRNA
2330392 2330466 - 75 148266447 SaurJH9_R0078 - 07 Asn tRNA
2330475 2330593 - 119 148266447 SaurJH9_R0079 - 5S ribosomal RNA
2330664 2333586 - 2923 148266447 SaurJH9_R0080 - 23S ribosomal RNA
2334049 2335610 - 1562 148266447 SaurJH9_R0081 - 16S ribosomal RNA
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