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   LOCUS       NC_009436            4518712 bp    DNA     circular BCT 14-AUG-2007
   DEFINITION  Enterobacter sp. 638, complete genome.
   ACCESSION   NC_009436
   VERSION     NC_009436.1  GI:146309667
   KEYWORDS    .
   SOURCE      Enterobacter sp. 638
     ORGANISM  Enterobacter sp. 638
               Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
               Enterobacteriaceae; Enterobacter.
   REFERENCE   1  (bases 1 to 4518712)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Glavina del Rio,T.,
               Dalin,E., Tice,H., Pitluck,S., Kiss,H., Brettin,T., Bruce,D.,
               Detter,J.C., Han,C., Tapia,R., Gilna,P., Schmutz,J., Larimer,F.,
               Land,M., Hauser,L., Kyrpides,N., Kim,E., Taghavi,S., Newman,L.,
               Vangronsveld,J., van der Lelie,D. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Complete sequence of chromosome of Enterobacter sp. 638
     JOURNAL   Unpublished
   REFERENCE   2  (bases 1 to 4518712)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (08-MAY-2007) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 4518712)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Glavina del Rio,T.,
               Dalin,E., Tice,H., Pitluck,S., Kiss,H., Brettin,T., Bruce,D.,
               Detter,J.C., Han,C., Tapia,R., Gilna,P., Schmutz,J., Larimer,F.,
               Land,M., Hauser,L., Kyrpides,N., Kim,E., Taghavi,S., Newman,L.,
               Vangronsveld,J., van der Lelie,D. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Direct Submission
     JOURNAL   Submitted (06-APR-2007) US DOE Joint Genome Institute, 2800
               Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000653.
               URL -- http://www.jgi.doe.gov
               JGI Project ID: 4002721
               Source DNA and bacteria available from Daniel van der Lelie
               (vdlelied@bnl.gov)
               Contacts: Daniel van der Lelie (vdlelied@bnl.gov)
                         Paul Richardson (microbes@cuba.jgi-psf.org)
               Quality assurance done by JGI-Stanford
               Annotation done by JGI-ORNL and JGI-PGF
               Finishing done by JGI-LANL
               Finished microbial genomes have been curated to close all gaps with
               greater than 98% coverage of at least two independent clones. Each
               base pair has a minimum q (quality) value of 30 and the total error
               rate is less than one per 50000.
               The JGI and collaborators endorse the principles for the
               distribution and use of large scale sequencing data adopted by the
               larger genome sequencing community and urge users of this data to
               follow them. It is our intention to publish the work of this
               project in a timely fashion and we welcome collaborative
               interaction on the project and analysis.
               (http://www.genome.gov/page.cfm?pageID=10506376).
               COMPLETENESS: full length.


Расположение РНК

Начало Конец Направление Длина PID Ген COG Комментарий
85915 86005 - 91 146309667 Ent638_R0001 - Sec tRNA
205148 205224 + 77 146309667 Ent638_R0002 - 03 Pro tRNA
220280 220355 + 76 146309667 Ent638_R0003 - 12 Thr tRNA
220364 220448 + 85 146309667 Ent638_R0004 - 18 Tyr tRNA
220564 220638 + 75 146309667 Ent638_R0005 - 01 Gly tRNA
220645 220720 + 76 146309667 Ent638_R0006 - 12 Thr tRNA
250882 252426 + 1545 146309667 Ent638_R0007 - 16S ribosomal RNA
252506 252581 + 76 146309667 Ent638_R0008 - 04 Glu tRNA
252813 255725 + 2913 146309667 Ent638_R0009 - 23S ribosomal RNA
255816 255942 + 127 146309667 Ent638_R0010 - 5S ribosomal RNA
371299 371374 - 76 146309667 Ent638_R0011 - 17 Phe tRNA
399597 399672 + 76 146309667 Ent638_R0012 - 01 Gly tRNA
399769 399844 + 76 146309667 Ent638_R0013 - 01 Gly tRNA
399941 400016 + 76 146309667 Ent638_R0014 - 01 Gly tRNA
523489 523573 + 85 146309667 Ent638_R0015 - 15 Leu tRNA
596702 596788 - 87 146309667 Ent638_R0016 - 15 Leu tRNA
596820 596906 - 87 146309667 Ent638_R0017 - 15 Leu tRNA
596935 597021 - 87 146309667 Ent638_R0018 - 15 Leu tRNA
838233 839777 + 1545 146309667 Ent638_R0019 - 16S ribosomal RNA
839845 839921 + 77 146309667 Ent638_R0020 - 14 Ile tRNA
840030 840105 + 76 146309667 Ent638_R0021 - 02 Ala tRNA
840314 843225 + 2912 146309667 Ent638_R0022 - 23S ribosomal RNA
843316 843439 + 124 146309667 Ent638_R0023 - 5S ribosomal RNA
843490 843566 + 77 146309667 Ent638_R0024 - 06 Asp tRNA
852194 852270 + 77 146309667 Ent638_R0025 - 06 Asp tRNA
875530 875605 + 76 146309667 Ent638_R0026 - 12 Thr tRNA
1026638 1026755 + 118 146309667 Ent638_R0027 - SRP RNA; RNA component of signal recognition particle
1107772 1107848 + 77 146309667 Ent638_R0028 - 11 Arg tRNA
1305246 1305320 - 75 146309667 Ent638_R0029 - 05 Gln tRNA
1305358 1305432 - 75 146309667 Ent638_R0030 - 05 Gln tRNA
1305478 1305554 - 77 146309667 Ent638_R0031 - 16 Met tRNA
1305571 1305645 - 75 146309667 Ent638_R0032 - 05 Gln tRNA
1305678 1305752 - 75 146309667 Ent638_R0033 - 05 Gln tRNA
1305775 1305859 - 85 146309667 Ent638_R0034 - 15 Leu tRNA
1305869 1305945 - 77 146309667 Ent638_R0035 - 16 Met tRNA
1365991 1366066 + 76 146309667 Ent638_R0036 - 10 Lys tRNA
1366189 1366264 + 76 146309667 Ent638_R0037 - 13 Val tRNA
1366268 1366343 + 76 146309667 Ent638_R0038 - 10 Lys tRNA
1366484 1366559 + 76 146309667 Ent638_R0039 - 10 Lys tRNA
1366590 1366665 + 76 146309667 Ent638_R0040 - 10 Lys tRNA
1638951 1639038 + 88 146309667 Ent638_R0041 - 08 Ser tRNA
1639171 1639258 + 88 146309667 Ent638_R0042 - 08 Ser tRNA
1706012 1706099 - 88 146309667 Ent638_R0043 - 08 Ser tRNA
1706328 1706415 - 88 146309667 Ent638_R0044 - 08 Ser tRNA
1938960 1939036 - 77 146309667 Ent638_R0045 - 13 Val tRNA
1939041 1939117 - 77 146309667 Ent638_R0046 - 13 Val tRNA
2490349 2490433 + 85 146309667 Ent638_R0047 - 18 Tyr tRNA
2490642 2490726 + 85 146309667 Ent638_R0048 - 18 Tyr tRNA
2696719 2696804 - 86 146309667 Ent638_R0049 - 15 Leu tRNA
2696817 2696890 - 74 146309667 Ent638_R0050 - 19 Cys tRNA
2696937 2697012 - 76 146309667 Ent638_R0051 - 01 Gly tRNA
2759751 2759846 - 96 146309667 Ent638_R0052 - Xaa tRNA
2760835 2760910 + 76 146309667 Ent638_R0053 - 07 Asn tRNA
2763761 2763836 + 76 146309667 Ent638_R0054 - 07 Asn tRNA
2778273 2778348 - 76 146309667 Ent638_R0055 - 07 Asn tRNA
2780100 2780175 + 76 146309667 Ent638_R0056 - 07 Asn tRNA
3009772 3009848 + 77 146309667 Ent638_R0057 - 03 Pro tRNA
3125404 3125478 + 75 146309667 Ent638_R0058 - 11 Arg tRNA
3180686 3180761 - 76 146309667 Ent638_R0059 - 02 Ala tRNA
3180801 3180876 - 76 146309667 Ent638_R0060 - 02 Ala tRNA
3183575 3183650 + 76 146309667 Ent638_R0061 - 13 Val tRNA
3183695 3183770 + 76 146309667 Ent638_R0062 - 13 Val tRNA
3183807 3183882 + 76 146309667 Ent638_R0063 - 13 Val tRNA
3183886 3183961 + 76 146309667 Ent638_R0064 - 10 Lys tRNA
3342737 3342863 - 127 146309667 Ent638_R0065 - 5S ribosomal RNA
3342953 3345864 - 2912 146309667 Ent638_R0066 - 23S ribosomal RNA
3346096 3346171 - 76 146309667 Ent638_R0067 - 04 Glu tRNA
3346252 3347796 - 1545 146309667 Ent638_R0068 - 16S ribosomal RNA
3374760 3375119 + 360 146309667 Ent638_R0069 - tmRNA
3453621 3453697 - 77 146309667 Ent638_R0070 - 11 Arg tRNA
3453727 3453803 - 77 146309667 Ent638_R0071 - 11 Arg tRNA
3453833 3453909 - 77 146309667 Ent638_R0072 - 11 Arg tRNA
3454107 3454183 - 77 146309667 Ent638_R0073 - 11 Arg tRNA
3454188 3454280 - 93 146309667 Ent638_R0074 - 08 Ser tRNA
3552385 3552461 + 77 146309667 Ent638_R0075 - 16 Met tRNA
3552521 3552597 + 77 146309667 Ent638_R0076 - 16 Met tRNA
3552655 3552731 + 77 146309667 Ent638_R0077 - 16 Met tRNA
3610093 3610166 - 74 146309667 Ent638_R0078 - 01 Gly tRNA
3687340 3687415 + 76 146309667 Ent638_R0079 - 17 Phe tRNA
3783413 3783488 + 76 146309667 Ent638_R0080 - 16 Met tRNA
3913153 3913229 - 77 146309667 Ent638_R0081 - 16 Met tRNA
3915107 3915193 - 87 146309667 Ent638_R0082 - 15 Leu tRNA
4023722 4023853 - 132 146309667 Ent638_R0083 - 5S ribosomal RNA
4023887 4023962 - 76 146309667 Ent638_R0084 - 12 Thr tRNA
4023973 4024096 - 124 146309667 Ent638_R0085 - 5S ribosomal RNA
4024186 4027097 - 2912 146309667 Ent638_R0086 - 23S ribosomal RNA
4027329 4027404 - 76 146309667 Ent638_R0087 - 04 Glu tRNA
4027485 4029029 - 1545 146309667 Ent638_R0088 - 16S ribosomal RNA
4269384 4269510 - 127 146309667 Ent638_R0089 - 5S ribosomal RNA
4269600 4272511 - 2912 146309667 Ent638_R0090 - 23S ribosomal RNA
4272720 4272795 - 76 146309667 Ent638_R0091 - 02 Ala tRNA
4272904 4272980 - 77 146309667 Ent638_R0092 - 14 Ile tRNA
4273048 4274592 - 1545 146309667 Ent638_R0093 - 16S ribosomal RNA
4327269 4327345 - 77 146309667 Ent638_R0094 - 03 Pro tRNA
4327389 4327475 - 87 146309667 Ent638_R0095 - 15 Leu tRNA
4327495 4327570 - 76 146309667 Ent638_R0096 - 09 His tRNA
4327637 4327713 - 77 146309667 Ent638_R0097 - 11 Arg tRNA
4360201 4360276 - 76 146309667 Ent638_R0098 - 20 Trp tRNA
4360331 4360407 - 77 146309667 Ent638_R0099 - 06 Asp tRNA
4360459 4360582 - 124 146309667 Ent638_R0100 - 5S ribosomal RNA
4360672 4363584 - 2913 146309667 Ent638_R0101 - 23S ribosomal RNA
4363793 4363868 - 76 146309667 Ent638_R0102 - 02 Ala tRNA
4363977 4364053 - 77 146309667 Ent638_R0103 - 14 Ile tRNA
4364121 4365665 - 1545 146309667 Ent638_R0104 - 16S ribosomal RNA
4466199 4466325 - 127 146309667 Ent638_R0105 - 5S ribosomal RNA
4466415 4469326 - 2912 146309667 Ent638_R0106 - 23S ribosomal RNA
4469558 4469633 - 76 146309667 Ent638_R0107 - 04 Glu tRNA
4469715 4471259 - 1545 146309667 Ent638_R0108 - 16S ribosomal RNA
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