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   LOCUS       NC_009337            1966858 bp    DNA     circular BCT 14-AUG-2007
   DEFINITION  Prosthecochloris vibrioformis DSM 265, complete genome.
   ACCESSION   NC_009337
   VERSION     NC_009337.1  GI:145218822
   KEYWORDS    .
   SOURCE      Prosthecochloris vibrioformis DSM 265
     ORGANISM  Prosthecochloris vibrioformis DSM 265
               Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae;
               Chlorobium/Pelodictyon group; Chlorobium.
   REFERENCE   1  (bases 1 to 1966858)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
               del Rio,T., Hammon,N., Israni,S., Pitluck,S., Schmutz,J.,
               Larimer,F., Land,M., Hauser,L., Mikhailova,N., Li,T., Overmann,J.,
               Schuster,S.C., Bryant,D.A. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Complete sequence of Prosthecochloris vibrioformis DSM 265
     JOURNAL   Unpublished
   REFERENCE   2  (bases 1 to 1966858)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (13-APR-2007) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 1966858)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
               del Rio,T., Hammon,N., Israni,S., Pitluck,S., Schmutz,J.,
               Larimer,F., Land,M., Hauser,L., Mikhailova,N., Li,T., Overmann,J.,
               Schuster,S.C., Bryant,D.A. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Direct Submission
     JOURNAL   Submitted (05-MAR-2007) US DOE Joint Genome Institute, 2800
               Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000607.
               URL -- http://www.jgi.doe.gov
               JGI Project ID: 3634473
               Source DNA and bacteria available from Donald A. Bryant
               (dab14@psu.edu)
               Contacts: Donald A. Bryant (dab14@psu.edu)
                         Paul Richardson (microbes@cuba.jgi-psf.org)
               Quality assurance done by JGI-Stanford
               Annotation done by JGI-ORNL and JGI-PGF
               Finishing done by Donald A. Bryant
               Finished microbial genomes have been curated to close all gaps with
               greater than 98% coverage of at least two independent clones. Each
               base pair has a minimum q (quality) value of 30 and the total error
               rate is less than one per 50000.
               The JGI and collaborators endorse the principles for the
               distribution and use of large scale sequencing data adopted by the
               larger genome sequencing community and urge users of this data to
               follow them. It is our intention to publish the work of this
               project in a timely fashion and we welcome collaborative
               interaction on the project and analysis.
               (http://www.genome.gov/page.cfm?pageID=10506376)
               Additional Notes: By phylogeny it does not cluster with the type
               species of Prosthecochloris (P. aestuarii DSM 271) and it's closest
               relative is Chlorobium phaeovibrioides DSM 269. Also see the
               Comments and References of the NCBI Taxomy Browser for
               Prosthecochloris vibrioformis DSM 265.
               COMPLETENESS: full length.


Расположение РНК[]

Начало Конец Направление Длина PID Ген COG Комментарий
30724 30799 - 76 145218822 Cvib_R0001 - 12 Thr tRNA
155961 156037 + 77 145218822 Cvib_R0002 - 13 Val tRNA
191773 193279 + 1507 145218822 Cvib_R0003 - 16S ribosomal RNA
193441 193517 + 77 145218822 Cvib_R0004 - 14 Ile tRNA
193562 193637 + 76 145218822 Cvib_R0005 - 02 Ala tRNA
193777 196682 + 2906 145218822 Cvib_R0006 - 23S ribosomal RNA
196798 196917 + 120 145218822 Cvib_R0007 - 5S ribosomal RNA
221833 221907 - 75 145218822 Cvib_R0008 - 07 Asn tRNA
265126 265198 + 73 145218822 Cvib_R0009 - 01 Gly tRNA
411414 411488 - 75 145218822 Cvib_R0010 - 06 Asp tRNA
558852 558924 - 73 145218822 Cvib_R0011 - 02 Ala tRNA
653522 653595 + 74 145218822 Cvib_R0012 - 13 Val tRNA
671222 671308 - 87 145218822 Cvib_R0013 - 08 Ser tRNA
672620 672695 - 76 145218822 Cvib_R0014 - 01 Gly tRNA
801554 801901 - 348 145218822 Cvib_R0015 - RNaseP RNA
802967 803048 - 82 145218822 Cvib_R0016 - 15 Leu tRNA
840408 840484 - 77 145218822 Cvib_R0017 - 13 Val tRNA
869339 869414 + 76 145218822 Cvib_R0018 - 16 Met tRNA
1045309 1045382 + 74 145218822 Cvib_R0019 - 19 Cys tRNA
1162288 1162363 - 76 145218822 Cvib_R0020 - 03 Pro tRNA
1162376 1162448 - 73 145218822 Cvib_R0021 - 11 Arg tRNA
1182416 1182492 + 77 145218822 Cvib_R0022 - 16 Met tRNA
1182496 1182571 + 76 145218822 Cvib_R0023 - 01 Gly tRNA
1189890 1189979 - 90 145218822 Cvib_R0024 - 08 Ser tRNA
1189991 1190073 - 83 145218822 Cvib_R0025 - 08 Ser tRNA
1190335 1190424 - 90 145218822 Cvib_R0026 - 08 Ser tRNA
1238940 1239021 + 82 145218822 Cvib_R0027 - 15 Leu tRNA
1239038 1239124 + 87 145218822 Cvib_R0028 - 15 Leu tRNA
1250474 1250549 - 76 145218822 Cvib_R0029 - 10 Lys tRNA
1256678 1256749 - 72 145218822 Cvib_R0030 - 04 Glu tRNA
1256758 1256833 - 76 145218822 Cvib_R0031 - 09 His tRNA
1256864 1256939 - 76 145218822 Cvib_R0032 - 11 Arg tRNA
1256964 1257036 - 73 145218822 Cvib_R0033 - 03 Pro tRNA
1267599 1267673 + 75 145218822 Cvib_R0034 - 05 Gln tRNA
1286491 1286889 - 399 145218822 Cvib_R0035 - tmRNA
1365260 1365333 + 74 145218822 Cvib_R0036 - 16 Met tRNA
1365370 1365443 + 74 145218822 Cvib_R0037 - 04 Glu tRNA
1365491 1365567 + 77 145218822 Cvib_R0038 - 11 Arg tRNA
1365578 1365649 + 72 145218822 Cvib_R0039 - 05 Gln tRNA
1674295 1674367 - 73 145218822 Cvib_R0040 - 17 Phe tRNA
1709556 1709637 - 82 145218822 Cvib_R0041 - 15 Leu tRNA
1709674 1709746 - 73 145218822 Cvib_R0042 - 10 Lys tRNA
1753991 1754079 + 89 145218822 Cvib_R0043 - 15 Leu tRNA
1762444 1762517 - 74 145218822 Cvib_R0044 - 03 Pro tRNA
1795284 1795356 - 73 145218822 Cvib_R0045 - 20 Trp tRNA
1795385 1795457 - 73 145218822 Cvib_R0046 - 12 Thr tRNA
1795482 1795564 - 83 145218822 Cvib_R0047 - 18 Tyr tRNA
1795578 1795650 - 73 145218822 Cvib_R0048 - 12 Thr tRNA
1809396 1809471 - 76 145218822 Cvib_R0049 - 11 Arg tRNA
1923540 1923643 - 104 145218822 Cvib_R0050 - SRP RNA; RNA component of signal recognition particle
1933562 1933637 - 76 145218822 Cvib_R0051 - 02 Ala tRNA
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