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   LOCUS       NC_008705            5737227 bp    DNA     circular BCT 22-DEC-2006
   DEFINITION  Mycobacterium sp. KMS, complete genome.
   ACCESSION   NC_008705
   VERSION     NC_008705.1  GI:119866057
   KEYWORDS    .
   SOURCE      Mycobacterium sp. KMS
     ORGANISM  Mycobacterium sp. KMS
               Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
               Corynebacterineae; Mycobacteriaceae; Mycobacterium.
   REFERENCE   1  (bases 1 to 5737227)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
               del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
               Kiss,H., Brettin,T., Bruce,D., Han,C., Tapia,R., Gilna,P.,
               Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N.,
               Mikhailova,N., Miller,C.D. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Complete sequence of chromosome of Mycobacterium sp. KMS
     JOURNAL   Unpublished
   REFERENCE   2  (bases 1 to 5737227)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (22-DEC-2006) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 5737227)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
               del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
               Kiss,H., Brettin,T., Bruce,D., Han,C., Tapia,R., Gilna,P.,
               Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N.,
               Mikhailova,N., Miller,C.D. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Direct Submission
     JOURNAL   Submitted (18-DEC-2006) US DOE Joint Genome Institute, 2800
               Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000518.
               URL -- http://www.jgi.doe.gov
               JGI Project ID: 4000379
               Source DNA and bacteria available from Charles Miller
               (cdmiller@biology.usu.edu)
               Contacts: Charles Miller (cdmiller@biology.usu.edu)
                         Paul Richardson (microbes@cuba.jgi-psf.org)
               Quality assurance done by JGI-Stanford
               Annotation done by JGI-ORNL and JGI-PGF
               Finishing done by JGI-LANL
               Finished microbial genomes have been curated to close all gaps with
               greater than 98% coverage of at least two independent clones. Each
               base pair has a minimum q (quality) value of 30 and the total error
               rate is less than one per 50000.
               The JGI and collaborators endorse the principles for the
               distribution and use of large scale sequencing data adopted by the
               larger genome sequencing community and urge users of this data to
               follow them. It is our intention to publish the work of this
               project in a timely fashion and we welcome collaborative
               interaction on the project and analysis.
               (http://www.genome.gov/page.cfm?pageID=10506376).
               COMPLETENESS: full length.


Расположение РНК[]

Начало Конец Направление Длина PID Ген COG Комментарий
18907 18980 + 74 119866057 Mkms_R0001 - 14 Ile tRNA
19142 19214 + 73 119866057 Mkms_R0002 - 02 Ala tRNA
32570 32652 + 83 119866057 Mkms_R0003 - 15 Leu tRNA
484820 484893 - 74 119866057 Mkms_R0004 - 01 Gly tRNA
839814 839899 + 86 119866057 Mkms_R0005 - 18 Tyr tRNA
1021345 1021417 + 73 119866057 Mkms_R0006 - 12 Thr tRNA
1021449 1021522 + 74 119866057 Mkms_R0007 - 16 Met tRNA
1023365 1023440 + 76 119866057 Mkms_R0008 - 20 Trp tRNA
1545177 1545253 + 77 119866057 Mkms_R0009 - 16 Met tRNA
1756909 1757275 + 367 119866057 Mkms_R0010 - tmRNA
1886096 1886168 + 73 119866057 Mkms_R0011 - 02 Ala tRNA
2084396 2084467 + 72 119866057 Mkms_R0012 - 05 Gln tRNA
2084530 2084602 + 73 119866057 Mkms_R0013 - 04 Glu tRNA
2385778 2385852 - 75 119866057 Mkms_R0014 - 13 Val tRNA
2385866 2385939 - 74 119866057 Mkms_R0015 - 19 Cys tRNA
2385963 2386038 - 76 119866057 Mkms_R0016 - 01 Gly tRNA
2386290 2386364 + 75 119866057 Mkms_R0017 - 13 Val tRNA
3098119 3098192 - 74 119866057 Mkms_R0018 - 03 Pro tRNA
3131074 3131187 - 114 119866057 Mkms_R0019 - 5S ribosomal RNA
3131299 3134444 - 3146 119866057 Mkms_R0020 - 23S ribosomal RNA
3134870 3136384 - 1515 119866057 Mkms_R0021 - 16S ribosomal RNA
3187578 3187648 - 71 119866057 Mkms_R0022 - 19 Cys tRNA
3211144 3211220 + 77 119866057 Mkms_R0023 - 15 Leu tRNA
3384138 3384223 + 86 119866057 Mkms_R0024 - 15 Leu tRNA
3398041 3398120 + 80 119866057 Mkms_R0025 - 10 Lys tRNA
3565169 3565520 - 352 119866057 Mkms_R0026 - RNA component of RNaseP
3587331 3587402 - 72 119866057 Mkms_R0027 - 13 Val tRNA
3664104 3664180 - 77 119866057 Mkms_R0028 - 16 Met tRNA
3679367 3679439 - 73 119866057 Mkms_R0029 - 07 Asn tRNA
3846888 3846964 - 77 119866057 Mkms_R0030 - 03 Pro tRNA
3847105 3847178 + 74 119866057 Mkms_R0031 - 01 Gly tRNA
3900767 3900839 + 73 119866057 Mkms_R0032 - 11 Arg tRNA
3921322 3921397 + 76 119866057 Mkms_R0033 - 09 His tRNA
3922832 3922907 + 76 119866057 Mkms_R0034 - 10 Lys tRNA
4120167 4120250 - 84 119866057 Mkms_R0035 - 15 Leu tRNA
4154603 4154716 - 114 119866057 Mkms_R0036 - 5S ribosomal RNA
4154816 4157978 - 3163 119866057 Mkms_R0037 - 23S ribosomal RNA
4158410 4159924 - 1515 119866057 Mkms_R0038 - 16S ribosomal RNA
4187458 4187533 + 76 119866057 Mkms_R0039 - 11 Arg tRNA
4508159 4508232 - 74 119866057 Mkms_R0040 - 15 Leu tRNA
4553232 4553306 + 75 119866057 Mkms_R0041 - 05 Gln tRNA
4593959 4594031 - 73 119866057 Mkms_R0042 - 02 Ala tRNA
4696189 4696261 + 73 119866057 Mkms_R0043 - 11 Arg tRNA
4824359 4824435 - 77 119866057 Mkms_R0045 - 17 Phe tRNA
4824478 4824554 - 77 119866057 Mkms_R0046 - 06 Asp tRNA
4824588 4824660 - 73 119866057 Mkms_R0047 - 04 Glu tRNA
4824781 4824856 + 76 119866057 Mkms_R0048 - 10 Lys tRNA
4906199 4906273 + 75 119866057 Mkms_R0049 - 12 Thr tRNA
5113306 5113378 - 73 119866057 Mkms_R0051 - 12 Thr tRNA
5149293 5149366 + 74 119866057 Mkms_R0052 - 03 Pro tRNA
5240094 5240187 - 94 119866057 Mkms_R0053 - SRP RNA; RNA component of signal recognition particle
5240260 5240345 + 86 119866057 Mkms_R0054 - 08 Ser tRNA
5289378 5289468 - 91 119866057 Mkms_R0055 - 08 Ser tRNA
5307563 5307635 - 73 119866057 Mkms_R0056 - 11 Arg tRNA
5307674 5307765 - 92 119866057 Mkms_R0057 - 08 Ser tRNA
5311180 5311266 - 87 119866057 Mkms_R0058 - 08 Ser tRNA
5539496 5539590 + 95 119866057 Mkms_R0060 - Sec tRNA
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