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   LOCUS       NC_007760            5013479 bp    DNA     circular BCT 31-MAR-2006
   DEFINITION  Anaeromyxobacter dehalogenans 2CP-C, complete genome.
   ACCESSION   NC_007760
   VERSION     NC_007760.1  GI:86156430
   KEYWORDS    .
   SOURCE      Anaeromyxobacter dehalogenans 2CP-C
     ORGANISM  Anaeromyxobacter dehalogenans 2CP-C
               Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales;
               Cystobacterineae; Myxococcaceae; Anaeromyxobacter.
   REFERENCE   1  (bases 1 to 5013479)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
               Glavina,T., Hammon,N., Israni,S., Pitluck,S., Brettin,T., Bruce,D.,
               Han,C., Tapia,R., Gilna,P., Kiss,H., Schmutz,J., Larimer,F.,
               Land,M., Kyrpides,N., Anderson,I., Sanford,R.A., Ritalahti,K.M.,
               Thomas,H.S., Kirby,J.R., Zhulin,I.B., Loeffler,F.E. and
               Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Complete sequence of Anaeromyxobacter dehalogenans 2CP-C
     JOURNAL   Unpublished
   REFERENCE   2  (bases 1 to 5013479)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (30-JAN-2006) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 5013479)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
               Glavina,T., Hammon,N., Israni,S., Pitluck,S., Brettin,T., Bruce,D.,
               Han,C., Tapia,R., Gilna,P., Kiss,H., Schmutz,J., Larimer,F.,
               Land,M., Kyrpides,N., Anderson,I., Sanford,R.A., Ritalahti,K.M.,
               Thomas,H.S., Kirby,J.R., Zhulin,I.B., Loeffler,F.E. and
               Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Direct Submission
     JOURNAL   Submitted (24-JAN-2006) US DOE Joint Genome Institute, 2800
               Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000251.
               URL -- http://www.jgi.doe.gov
               Source DNA and bacteria available from Frank Loeffler
               (frank.loeffler@ce.gatech.edu)
               Contact: Paul Richardson (microbes@cuba.jgi-psf.org)
               Quality assurance done by JGI-Stanford
               Annotation done by JGI-ORNL and JGI-PGF
               Finishing done by JGI-LANL
               Finished microbial genomes have been curated to close all gaps with
               greater than 98% coverage of at least two independent clones. Each
               base pair has a minimum q (quality) value of 30 and the total error
               rate is less than one per 50000.
               The JGI and collaborators endorse the principles for the
               distribution and use of large scale sequencing data adopted by the
               larger genome sequencing community and urge users of this data to
               follow them. It is our intention to publish the work of this
               project in a timely fashion and we welcome collaborative
               interaction on the project and analysis.
               (http://www.genome.gov/page.cfm?pageID=10506376).
               COMPLETENESS: full length.


Расположение РНК

Начало Конец Направление Длина PID Ген COG Комментарий
7820 7893 + 74 86156430 Adeh_R0001 - 05 Gln tRNA
20677 20749 + 73 86156430 Adeh_R0002 - 17 Phe tRNA
415485 415560 - 76 86156430 Adeh_R0003 - 01 Gly tRNA
657535 657611 - 77 86156430 Adeh_R0004 - 06 Asp tRNA
657618 657692 - 75 86156430 Adeh_R0005 - 13 Val tRNA
684121 684204 - 84 86156430 Adeh_R0006 - 15 Leu tRNA
837154 837226 + 73 86156430 Adeh_R0007 - 16 Met tRNA
1026365 1026440 - 76 86156430 Adeh_R0008 - 02 Ala tRNA
1196871 1196944 - 74 86156430 Adeh_R0009 - 03 Pro tRNA
1331625 1331696 + 72 86156430 Adeh_R0010 - 19 Cys tRNA
1361322 1362863 + 1542 86156430 Adeh_R0011 - 16S ribosomal RNA
1363057 1363134 + 78 86156430 Adeh_R0012 - 14 Ile tRNA
1363154 1363229 + 76 86156430 Adeh_R0013 - 02 Ala tRNA
1363429 1366413 + 2985 86156430 Adeh_R0014 - 23S ribosomal RNA
1366555 1366671 + 117 86156430 Adeh_R0015 - 5S ribosomal RNA
1406598 1406673 - 76 86156430 Adeh_R0016 - 07 Asn tRNA
1684596 1684672 + 77 86156430 Adeh_R0017 - 11 Arg tRNA
1758984 1759065 - 82 86156430 Adeh_R0018 - 15 Leu tRNA
1786250 1786333 - 84 86156430 Adeh_R0019 - 15 Leu tRNA
1813945 1814017 + 73 86156430 Adeh_R0020 - 12 Thr tRNA
1814064 1814146 + 83 86156430 Adeh_R0021 - 18 Tyr tRNA
1814211 1814286 + 76 86156430 Adeh_R0022 - 01 Gly tRNA
1814309 1814381 + 73 86156430 Adeh_R0023 - 12 Thr tRNA
1815825 1815900 + 76 86156430 Adeh_R0024 - 20 Trp tRNA
1996880 1996955 + 76 86156430 Adeh_R0025 - 12 Thr tRNA
2058807 2058878 - 72 86156430 Adeh_R0026 - 13 Val tRNA
2097560 2097633 + 74 86156430 Adeh_R0027 - 16 Met tRNA
2130853 2130947 + 95 86156430 Adeh_R0028 - Sec tRNA
2222961 2223032 - 72 86156430 Adeh_R0029 - 13 Val tRNA
2638334 2638410 - 77 86156430 Adeh_R0030 - 16 Met tRNA
2756510 2756585 - 76 86156430 Adeh_R0031 - 02 Ala tRNA
2936679 2936753 - 75 86156430 Adeh_R0032 - 04 Glu tRNA
2936814 2936887 - 74 86156430 Adeh_R0033 - 05 Gln tRNA
2943690 2943806 - 117 86156430 Adeh_R0034 - 5S ribosomal RNA
2943948 2946932 - 2985 86156430 Adeh_R0035 - 23S ribosomal RNA
2947132 2947207 - 76 86156430 Adeh_R0036 - 02 Ala tRNA
2947227 2947304 - 78 86156430 Adeh_R0037 - 14 Ile tRNA
2947498 2949039 - 1542 86156430 Adeh_R0038 - 16S ribosomal RNA
3011270 3011341 - 72 86156430 Adeh_R0039 - 10 Lys tRNA
3023662 3023734 + 73 86156430 Adeh_R0040 - 04 Glu tRNA
3115944 3116017 + 74 86156430 Adeh_R0041 - 11 Arg tRNA
3759848 3759921 - 74 86156430 Adeh_R0042 - 03 Pro tRNA
3772910 3772997 + 88 86156430 Adeh_R0043 - 15 Leu tRNA
3863438 3863519 - 82 86156430 Adeh_R0044 - 15 Leu tRNA
3867975 3868047 - 73 86156430 Adeh_R0045 - 10 Lys tRNA
3868163 3868236 - 74 86156430 Adeh_R0046 - 11 Arg tRNA
3868263 3868337 - 75 86156430 Adeh_R0047 - 09 His tRNA
3868356 3868429 - 74 86156430 Adeh_R0048 - 11 Arg tRNA
3868471 3868544 - 74 86156430 Adeh_R0049 - 03 Pro tRNA
3980145 3980357 + 213 86156430 Adeh_R0050 -
4088991 4089065 - 75 86156430 Adeh_R0051 - 01 Gly tRNA
4138082 4138201 - 120 86156430 Adeh_R0052 - RNA component of RNaseP
4166364 4166475 - 112 86156430 Adeh_R0053 - SRP RNA; RNA component of signal recognition particle
4166537 4166626 - 90 86156430 Adeh_R0054 - 08 Ser tRNA
4166905 4166995 - 91 86156430 Adeh_R0055 - 08 Ser tRNA
4428761 4428850 + 90 86156430 Adeh_R0056 - 08 Ser tRNA
4428878 4428969 + 92 86156430 Adeh_R0057 - 08 Ser tRNA
4429043 4429119 + 77 86156430 Adeh_R0058 - 11 Arg tRNA
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