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   LOCUS       NC_007413            6365727 bp    DNA     circular BCT 16-JUN-2006
   DEFINITION  Anabaena variabilis ATCC 29413, complete genome.
   ACCESSION   NC_007413
   VERSION     NC_007413.1  GI:75906225
   KEYWORDS    .
   SOURCE      Anabaena variabilis ATCC 29413 (Anabaena flos-aquae UTEX 1444)
     ORGANISM  Anabaena variabilis ATCC 29413
               Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.
   REFERENCE   1  (bases 1 to 6365727)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
               Glavina,T., Hammon,N., Israni,S., Pitluck,S., Saunders,E.H.,
               Schmutz,J., Larimer,F., Land,M., Kyrpides,N., Mavrommatis,K. and
               Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Complete sequence of Anabaena variabilis ATCC 29413
     JOURNAL   Unpublished
   REFERENCE   2  (bases 1 to 6365727)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (20-SEP-2005) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 6365727)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
               Glavina,T., Hammon,N., Israni,S., Pitluck,S., Saunders,E.H.,
               Schmutz,J., Larimer,F., Land,M., Kyrpides,N., Mavrommatis,K. and
               Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Direct Submission
     JOURNAL   Submitted (12-SEP-2005) US DOE Joint Genome Institute, 2800
               Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000117.
               URL -- http://www.jgi.doe.gov
               Source DNA available from Teresa Thiel (thiel@umsl.edu)
               Bacteria available from ATCC: ATCC 29413
               Whole genome sequencing and draft assembly at JGI-PGF
               Finishing done by JGI-LANL
               Quality assurance done by JGI-Stanford
               Annotation done by JGI-ORNL and JGI-PGF
               Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
               Finished microbial genomes have been curated to close all gaps with
               greater than 98% coverage of at least two independent clones. Each
               base pair has a minimum q (quality) value of 30 and the total error
               rate is less than one per 50000.
               COMPLETENESS: full length.


Расположение РНК

Начало Конец Направление Длина PID Ген COG Комментарий
238314 238386 - 73 75906225 Ava_R0001 - 11 Arg tRNA
505303 505384 + 82 75906225 Ava_R0002 - 15 Leu tRNA
649912 649992 - 81 75906225 Ava_R0003 - 15 Leu tRNA
906064 906140 - 77 75906225 Ava_R0004 - 16 Met tRNA
977788 978168 + 381 75906225 Ava_R0005 - RNA component of RNaseP
1002918 1004405 + 1488 75906225 Ava_R0006 - 16S ribosomal RNA
1004524 1004600 + 77 75906225 Ava_R0007 - 14 Ile tRNA
1004675 1004747 + 73 75906225 Ava_R0008 - 02 Ala tRNA
1004909 1007738 + 2830 75906225 Ava_R0009 - 23S ribosomal RNA
1007817 1007904 + 88 75906225 Ava_R0010 - 5S ribosomal RNA
1181925 1182011 - 87 75906225 Ava_R0011 - 08 Ser tRNA
1219577 1219650 - 74 75906225 Ava_R0012 - 13 Val tRNA
1424275 1424348 - 74 75906225 Ava_R0013 - 03 Pro tRNA
1768581 1768664 - 84 75906225 Ava_R0014 - 15 Leu tRNA
1777233 1777314 + 82 75906225 Ava_R0015 - 15 Leu tRNA
1828001 1828074 + 74 75906225 Ava_R0016 - 03 Pro tRNA
2133900 2133971 - 72 75906225 Ava_R0017 - 01 Gly tRNA
2470889 2470973 - 85 75906225 Ava_R0018 - 08 Ser tRNA
2494613 2494686 - 74 75906225 Ava_R0019 - 03 Pro tRNA
2508405 2508478 - 74 75906225 Ava_R0020 - 16 Met tRNA
2728122 2728193 - 72 75906225 Ava_R0021 - 12 Thr tRNA
2805098 2805185 - 88 75906225 Ava_R0022 - 5S ribosomal RNA
2805264 2808093 - 2830 75906225 Ava_R0023 - 23S ribosomal RNA
2808379 2809868 - 1490 75906225 Ava_R0024 - 16S ribosomal RNA
2938911 2938983 - 73 75906225 Ava_R0025 - 16 Met tRNA
3109711 3109782 + 72 75906225 Ava_R0026 - 07 Asn tRNA
3123086 3123157 + 72 75906225 Ava_R0027 - 10 Lys tRNA
3152762 3152834 + 73 75906225 Ava_R0028 - 20 Trp tRNA
3175621 3175692 - 72 75906225 Ava_R0029 - 19 Cys tRNA
3230989 3231376 + 388 75906225 Ava_R0030 - tmRNA
3373701 3373777 - 77 75906225 Ava_R0031 - 11 Arg tRNA
3497796 3497868 + 73 75906225 Ava_R0032 - 02 Ala tRNA
3620822 3620894 - 73 75906225 Ava_R0033 - 13 Val tRNA
3626041 3626113 - 73 75906225 Ava_R0034 - 09 His tRNA
3894075 3895562 + 1488 75906225 Ava_R0035 - 16S ribosomal RNA
3895681 3895757 + 77 75906225 Ava_R0036 - 14 Ile tRNA
3895832 3895904 + 73 75906225 Ava_R0037 - 02 Ala tRNA
3896066 3898895 + 2830 75906225 Ava_R0038 - 23S ribosomal RNA
3898974 3899061 + 88 75906225 Ava_R0039 - 5S ribosomal RNA
3948182 3948253 + 72 75906225 Ava_R0040 - 12 Thr tRNA
4023869 4023939 + 71 75906225 Ava_R0041 - 01 Gly tRNA
4227295 4227368 - 74 75906225 Ava_R0042 - 11 Arg tRNA
4251344 4251416 + 73 75906225 Ava_R0043 - 02 Ala tRNA
4716359 4716431 - 73 75906225 Ava_R0044 - 02 Ala tRNA
4743213 4743297 + 85 75906225 Ava_R0045 - 08 Ser tRNA
5209413 5209484 - 72 75906225 Ava_R0046 - 01 Gly tRNA
5292215 5292286 - 72 75906225 Ava_R0047 - 05 Gln tRNA
5364031 5364102 + 72 75906225 Ava_R0048 - 10 Lys tRNA
5432377 5432464 - 88 75906225 Ava_R0049 - 5S ribosomal RNA
5432543 5435372 - 2830 75906225 Ava_R0050 - 23S ribosomal RNA
5435534 5435606 - 73 75906225 Ava_R0051 - 02 Ala tRNA
5435681 5435757 - 77 75906225 Ava_R0052 - 14 Ile tRNA
5435874 5437363 - 1490 75906225 Ava_R0053 - 16S ribosomal RNA
5535659 5535760 - 102 75906225 Ava_R0054 - SRP RNA; RNA component of signal recognitionparticle
5557813 5557885 - 73 75906225 Ava_R0055 - 17 Phe tRNA
5580255 5580330 + 76 75906225 Ava_R0056 - 04 Glu tRNA
5802515 5802589 + 75 75906225 Ava_R0057 - 07 Asn tRNA
6024507 6024598 - 92 75906225 Ava_R0058 - 08 Ser tRNA
6126002 6126075 - 74 75906225 Ava_R0059 - 06 Asp tRNA
6278819 6278904 + 86 75906225 Ava_R0060 - 18 Tyr tRNA
6278962 6279033 + 72 75906225 Ava_R0061 - 12 Thr tRNA
6341525 6341598 - 74 75906225 Ava_R0062 - 11 Arg tRNA
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