LOCUS NC_006142 1111496 bp DNA circular BCT 03-APR-2006
DEFINITION Rickettsia typhi str. Wilmington, complete genome.
ACCESSION NC_006142
VERSION NC_006142.1 GI:51473215
KEYWORDS .
SOURCE Rickettsia typhi str. Wilmington
ORGANISM Rickettsia typhi str. Wilmington
Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;
Rickettsiaceae; Rickettsieae; Rickettsia; typhus group.
REFERENCE 1 (bases 1 to 1111496)
AUTHORS McLeod,M.P., Qin,X., Karpathy,S.E., Gioia,J., Highlander,S.K.,
Fox,G.E., McNeill,T.Z., Jiang,H., Muzny,D., Jacob,L.S., Hawes,A.C.,
Sodergren,E., Gill,R., Hume,J., Morgan,M., Fan,G., Amin,A.G.,
Gibbs,R.A., Hong,C., Yu,X.-J., Walker,D.H. and Weinstock,G.M.
TITLE Complete Genome Sequence of Rickettsia typhi and Comparison with
Sequences of Other Rickettsiae
JOURNAL J. Bacteriol. 186 (17), 5842-5855 (2004)
PUBMED 15317790
REFERENCE 2 (bases 1 to 1111496)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2004) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1111496)
AUTHORS Weinstock,G.M.
TITLE Direct Submission
JOURNAL Submitted (21-NOV-2003) Human Genome Sequencing Center, Baylor
College of Medicine, 1 Baylor Plaza, Houston, TX 77035, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AE017197.
COMPLETENESS: full length.
Расположение РНК[]
| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 8851 | 8926 | - | 76 | 51473215 | RT0009 | - | 17 Phe tRNA |
| 18164 | 18238 | + | 75 | 51473215 | RT0016 | - | 04 Glu tRNA |
| 49021 | 49097 | - | 77 | 51473215 | RT0036 | - | 16 Met tRNA |
| 73530 | 73604 | - | 75 | 51473215 | RT0054 | - | 12 Thr tRNA |
| 156890 | 156965 | + | 76 | 51473215 | RT0122 | - | 20 Trp tRNA |
| 189873 | 189948 | - | 76 | 51473215 | RT0149 | - | 12 Thr tRNA |
| 256226 | 258987 | + | 2762 | 51473215 | RT0200 | - | 23S ribosomal RNA |
| 259213 | 259313 | + | 101 | 51473215 | RT0202 | - | 5S ribosomal RNA |
| 291448 | 291524 | + | 77 | 51473215 | RT0227 | - | 16 Met tRNA |
| 336968 | 337042 | + | 75 | 51473215 | RT0267 | - | 07 Asn tRNA |
| 440999 | 441073 | + | 75 | 51473215 | RT0349 | - | 19 Cys tRNA |
| 469419 | 469494 | + | 76 | 51473215 | RT0369 | - | 10 Lys tRNA |
| 469510 | 469586 | + | 77 | 51473215 | RT0370 | - | 14 Ile tRNA |
| 566513 | 566600 | - | 88 | 51473215 | RT0440 | - | 08 Ser tRNA |
| 584848 | 584938 | - | 91 | 51473215 | RT0454 | - | 08 Ser tRNA |
| 599153 | 599229 | + | 77 | 51473215 | RT0467 | - | 11 Arg tRNA |
| 599290 | 599364 | - | 75 | 51473215 | RT0468 | - | 05 Gln tRNA |
| 608807 | 609191 | - | 385 | 51473215 | RT0477 | - | tmRNA involved in trans translation (10SaRNA) |
| 644665 | 644741 | + | 77 | 51473215 | RT0504 | - | 06 Asp tRNA |
| 645793 | 645868 | - | 76 | 51473215 | RT0506 | - | 02 Ala tRNA |
| 649921 | 649997 | + | 77 | 51473215 | RT0510 | - | 13 Val tRNA |
| 698354 | 698430 | + | 77 | 51473215 | RT0545 | - | 11 Arg tRNA |
| 728672 | 728746 | - | 75 | 51473215 | RT0562 | - | 02 Ala tRNA |
| 739677 | 739763 | + | 87 | 51473215 | RT0571 | - | 15 Leu tRNA |
| 742580 | 742654 | + | 75 | 51473215 | RT0573 | - | 01 Gly tRNA |
| 779669 | 781167 | - | 1499 | 51473215 | RT0602 | - | 16S ribosomal RNA |
| 814509 | 814584 | - | 76 | 51473215 | RT0624 | - | 13 Val tRNA |
| 829903 | 829976 | - | 74 | 51473215 | RT0654 | - | 01 Gly tRNA |
| 830072 | 830157 | - | 86 | 51473215 | RT0655 | - | 18 Tyr tRNA |
| 839451 | 839536 | + | 86 | 51473215 | RT0663 | - | 15 Leu tRNA |
| 876546 | 876622 | + | 77 | 51473215 | RT0690 | - | 09 His tRNA |
| 910292 | 910802 | - | 511 | 51473215 | RT0715 | - | RNA component of RNAse P |
| 919389 | 919480 | + | 92 | 51473215 | RT0721 | - | 08 Ser tRNA |
| 960895 | 960971 | - | 77 | 51473215 | RT0757 | - | 16 Met tRNA |
| 1023768 | 1023844 | + | 77 | 51473215 | RT0801 | - | 03 Pro tRNA |
| 1054870 | 1054946 | - | 77 | 51473215 | RT0826 | - | 11 Arg tRNA |
| 1090183 | 1090265 | + | 83 | 51473215 | RT0854 | - | signal recognition particle RNA (4.5S RNA) |
| 1097820 | 1097904 | - | 85 | 51473215 | RT0864 | - | 15 Leu tRNA |
| 1101995 | 1102069 | - | 75 | 51473215 | RT0868 | - | 12 Thr tRNA |