LOCUS NC_005139 3354505 bp DNA circular BCT 03-APR-2006 DEFINITION Vibrio vulnificus YJ016 chromosome I, complete sequence. ACCESSION NC_005139 VERSION NC_005139.1 GI:37678184 KEYWORDS . SOURCE Vibrio vulnificus YJ016 ORGANISM Vibrio vulnificus YJ016 Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio. REFERENCE 1 (bases 1 to 3354505) AUTHORS Chen,C.Y., Wu,K.M., Chang,Y.C., Chang,C.H., Tsai,H.C., Liao,T.L., Liu,Y.M., Chen,H.J., Shen,A.B., Li,J.C., Su,T.L., Shao,C.P., Lee,C.T., Hor,L.I. and Tsai,S.F. TITLE Comparative genome analysis of Vibrio vulnificus, a marine pathogen JOURNAL Genome Res. 13 (12), 2577-2587 (2003) PUBMED 14656965 REFERENCE 2 (bases 1 to 3354505) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (10-SEP-2004) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3354505) CONSRTM NCBI Microbial Genomes Annotation Project TITLE Direct Submission JOURNAL Submitted (29-MAY-2002) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BA000037. COMPLETENESS: full length.
Расположение РНК[]
Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|
32728 | 34262 | + | 1535 | 37678184 | VVr001 | - | 16S ribosomal RNA |
34326 | 34402 | + | 77 | 37678184 | VVt001 | - | 14 Ile tRNA |
34413 | 34488 | + | 76 | 37678184 | VVt002 | - | 02 Ala tRNA |
34770 | 37657 | + | 2888 | 37678184 | VVr002 | - | 23S ribosomal RNA |
37812 | 37929 | + | 118 | 37678184 | VVr003 | - | 5S ribosomal RNA |
38032 | 38122 | + | 91 | 37678184 | VVt003 | - | 08 Ser tRNA |
49176 | 49252 | + | 77 | 37678184 | VVt004 | - | 11 Arg tRNA |
49291 | 49366 | + | 76 | 37678184 | VVt005 | - | 09 His tRNA |
49393 | 49469 | + | 77 | 37678184 | VVt006 | - | 03 Pro tRNA |
49544 | 49619 | + | 76 | 37678184 | VVt007 | - | 09 His tRNA |
49644 | 49720 | + | 77 | 37678184 | VVt008 | - | 03 Pro tRNA |
177895 | 179429 | + | 1535 | 37678184 | VVr004 | - | 16S ribosomal RNA |
179498 | 179573 | + | 76 | 37678184 | VVt009 | - | 04 Glu tRNA |
179575 | 179650 | + | 76 | 37678184 | VVt010 | - | 10 Lys tRNA |
179665 | 179740 | + | 76 | 37678184 | VVt011 | - | 02 Ala tRNA |
179755 | 179830 | + | 76 | 37678184 | VVt012 | - | 13 Val tRNA |
180171 | 183058 | + | 2888 | 37678184 | VVr005 | - | 23S ribosomal RNA |
183180 | 183297 | + | 118 | 37678184 | VVr006 | - | 5S ribosomal RNA |
183328 | 183404 | + | 77 | 37678184 | VVt013 | - | 06 Asp tRNA |
542304 | 542379 | - | 76 | 37678184 | VVt014 | - | 16 Met tRNA |
589305 | 589747 | + | 443 | 37678184 | VVs001 | - | RNA subunit of RNase P |
717240 | 718774 | + | 1535 | 37678184 | VVr007 | - | 16S ribosomal RNA |
718843 | 718918 | + | 76 | 37678184 | VVt015 | - | 04 Glu tRNA |
718920 | 718995 | + | 76 | 37678184 | VVt016 | - | 10 Lys tRNA |
719024 | 719099 | + | 76 | 37678184 | VVt017 | - | 13 Val tRNA |
719439 | 722326 | + | 2888 | 37678184 | VVr008 | - | 23S ribosomal RNA |
722447 | 722564 | + | 118 | 37678184 | VVr009 | - | 5S ribosomal RNA |
722596 | 722672 | + | 77 | 37678184 | VVt018 | - | 06 Asp tRNA |
722742 | 722818 | + | 77 | 37678184 | VVt019 | - | 20 Trp tRNA |
823056 | 823422 | - | 367 | 37678184 | VVs002 | - | tmRNA |
923519 | 923603 | - | 85 | 37678184 | VVt020 | - | 15 Leu tRNA |
923648 | 923722 | - | 75 | 37678184 | VVt021 | - | 05 Gln tRNA |
923779 | 923863 | - | 85 | 37678184 | VVt022 | - | 15 Leu tRNA |
923909 | 923983 | - | 75 | 37678184 | VVt023 | - | 05 Gln tRNA |
924039 | 924123 | - | 85 | 37678184 | VVt024 | - | 15 Leu tRNA |
924168 | 924242 | - | 75 | 37678184 | VVt025 | - | 05 Gln tRNA |
924297 | 924381 | - | 85 | 37678184 | VVt026 | - | 15 Leu tRNA |
924426 | 924502 | - | 77 | 37678184 | VVt027 | - | 16 Met tRNA |
924514 | 924598 | - | 85 | 37678184 | VVt028 | - | 15 Leu tRNA |
924644 | 924718 | - | 75 | 37678184 | VVt029 | - | 05 Gln tRNA |
924776 | 924860 | - | 85 | 37678184 | VVt030 | - | 15 Leu tRNA |
924903 | 924979 | - | 77 | 37678184 | VVt031 | - | 16 Met tRNA |
925057 | 925131 | - | 75 | 37678184 | VVt032 | - | 05 Gln tRNA |
925142 | 925226 | - | 85 | 37678184 | VVt033 | - | 15 Leu tRNA |
925265 | 925341 | - | 77 | 37678184 | VVt034 | - | 16 Met tRNA |
940448 | 940524 | + | 77 | 37678184 | VVt035 | - | 03 Pro tRNA |
952546 | 952622 | - | 77 | 37678184 | VVt036 | - | 11 Arg tRNA |
1067577 | 1067653 | - | 77 | 37678184 | VVt037 | - | 03 Pro tRNA |
1135031 | 1135115 | - | 85 | 37678184 | VVt038 | - | 18 Tyr tRNA |
1150964 | 1151074 | + | 111 | 37678184 | VVs003 | - | signal recognition particle RNA |
1179024 | 1179114 | - | 91 | 37678184 | VVt039 | - | 08 Ser tRNA |
1208714 | 1208789 | - | 76 | 37678184 | VVt040 | - | 07 Asn tRNA |
1249797 | 1249870 | + | 74 | 37678184 | VVt041 | - | 19 Cys tRNA |
1249874 | 1249949 | + | 76 | 37678184 | VVt042 | - | 01 Gly tRNA |
1250010 | 1250096 | + | 87 | 37678184 | VVt043 | - | 15 Leu tRNA |
1250122 | 1250197 | + | 76 | 37678184 | VVt044 | - | 01 Gly tRNA |
1535714 | 1535790 | + | 77 | 37678184 | VVt045 | - | 13 Val tRNA |
1535826 | 1535902 | + | 77 | 37678184 | VVt046 | - | 13 Val tRNA |
2281999 | 2282086 | - | 88 | 37678184 | VVt047 | - | 08 Ser tRNA |
2426246 | 2426322 | - | 77 | 37678184 | VVt048 | - | 11 Arg tRNA |
2751165 | 2751241 | - | 77 | 37678184 | VVt049 | - | 16 Met tRNA |
2751299 | 2751382 | - | 84 | 37678184 | VVt050 | - | 15 Leu tRNA |
2857088 | 2857164 | - | 77 | 37678184 | VVt051 | - | 11 Arg tRNA |
2857207 | 2857283 | - | 77 | 37678184 | VVt052 | - | 11 Arg tRNA |
2857373 | 2857449 | - | 77 | 37678184 | VVt053 | - | 11 Arg tRNA |
2857494 | 2857570 | - | 77 | 37678184 | VVt054 | - | 11 Arg tRNA |
2857661 | 2857737 | - | 77 | 37678184 | VVt055 | - | 11 Arg tRNA |
2857822 | 2857913 | - | 92 | 37678184 | VVt056 | - | 08 Ser tRNA |
2857937 | 2858013 | - | 77 | 37678184 | VVt057 | - | 11 Arg tRNA |
2858043 | 2858134 | - | 92 | 37678184 | VVt058 | - | 08 Ser tRNA |
2938124 | 2938199 | + | 76 | 37678184 | VVt059 | - | 17 Phe tRNA |
2938254 | 2938329 | + | 76 | 37678184 | VVt060 | - | 12 Thr tRNA |
2938344 | 2938419 | + | 76 | 37678184 | VVt061 | - | 07 Asn tRNA |
2940513 | 2940588 | + | 76 | 37678184 | VVt062 | - | 17 Phe tRNA |
2940647 | 2940722 | + | 76 | 37678184 | VVt063 | - | 12 Thr tRNA |
2940730 | 2940805 | + | 76 | 37678184 | VVt064 | - | 17 Phe tRNA |
2940845 | 2940920 | + | 76 | 37678184 | VVt065 | - | 07 Asn tRNA |
2940956 | 2941031 | + | 76 | 37678184 | VVt066 | - | 12 Thr tRNA |
2941072 | 2941147 | + | 76 | 37678184 | VVt067 | - | 07 Asn tRNA |
2942997 | 2943073 | - | 77 | 37678184 | VVt068 | - | 06 Asp tRNA |
2943137 | 2943254 | - | 118 | 37678184 | VVr010 | - | 5S ribosomal RNA |
2943261 | 2943336 | - | 76 | 37678184 | VVt069 | - | 12 Thr tRNA |
2943386 | 2943503 | - | 118 | 37678184 | VVr011 | - | 5S ribosomal RNA |
2943624 | 2946511 | - | 2888 | 37678184 | VVr012 | - | 23S ribosomal RNA |
2946788 | 2946863 | - | 76 | 37678184 | VVt070 | - | 04 Glu tRNA |
2946932 | 2948466 | - | 1535 | 37678184 | VVr013 | - | 16S ribosomal RNA |
2948802 | 2948919 | - | 118 | 37678184 | VVr014 | - | 5S ribosomal RNA |
2949041 | 2951928 | - | 2888 | 37678184 | VVr015 | - | 23S ribosomal RNA |
2952269 | 2952344 | - | 76 | 37678184 | VVt071 | - | 13 Val tRNA |
2952359 | 2952434 | - | 76 | 37678184 | VVt072 | - | 02 Ala tRNA |
2952449 | 2952524 | - | 76 | 37678184 | VVt073 | - | 10 Lys tRNA |
2952526 | 2952601 | - | 76 | 37678184 | VVt074 | - | 04 Glu tRNA |
2952670 | 2954200 | - | 1531 | 37678184 | VVr016 | - | 16S ribosomal RNA |
2963615 | 2963699 | - | 85 | 37678184 | VVt075 | - | 15 Leu tRNA |
3037536 | 3037612 | - | 77 | 37678184 | VVt076 | - | 20 Trp tRNA |
3037666 | 3037742 | - | 77 | 37678184 | VVt077 | - | 06 Asp tRNA |
3037774 | 3037891 | - | 118 | 37678184 | VVr017 | - | 5S ribosomal RNA |
3038013 | 3040900 | - | 2888 | 37678184 | VVr018 | - | 23S ribosomal RNA |
3041180 | 3041255 | - | 76 | 37678184 | VVt078 | - | 02 Ala tRNA |
3041266 | 3041342 | - | 77 | 37678184 | VVt079 | - | 14 Ile tRNA |
3041406 | 3042940 | - | 1535 | 37678184 | VVr019 | - | 16S ribosomal RNA |
3160255 | 3160331 | - | 77 | 37678184 | VVt080 | - | 16 Met tRNA |
3160374 | 3160450 | - | 77 | 37678184 | VVt081 | - | 16 Met tRNA |
3160492 | 3160568 | - | 77 | 37678184 | VVt082 | - | 16 Met tRNA |
3160611 | 3160687 | - | 77 | 37678184 | VVt083 | - | 16 Met tRNA |
3160741 | 3160816 | - | 76 | 37678184 | VVt084 | - | 01 Gly tRNA |
3160851 | 3160927 | - | 77 | 37678184 | VVt085 | - | 16 Met tRNA |
3160982 | 3161057 | - | 76 | 37678184 | VVt086 | - | 01 Gly tRNA |
3161154 | 3161229 | - | 76 | 37678184 | VVt087 | - | 01 Gly tRNA |
3161325 | 3161400 | - | 76 | 37678184 | VVt088 | - | 01 Gly tRNA |
3161434 | 3161509 | - | 76 | 37678184 | VVt089 | - | 01 Gly tRNA |
3161620 | 3161695 | - | 76 | 37678184 | VVt090 | - | 01 Gly tRNA |
3251167 | 3251242 | - | 76 | 37678184 | VVt091 | - | 12 Thr tRNA |
3251257 | 3251331 | - | 75 | 37678184 | VVt092 | - | 01 Gly tRNA |
3251367 | 3251451 | - | 85 | 37678184 | VVt093 | - | 18 Tyr tRNA |
3251499 | 3251574 | - | 76 | 37678184 | VVt094 | - | 12 Thr tRNA |
3257793 | 3257869 | - | 77 | 37678184 | VVt095 | - | 06 Asp tRNA |
3257901 | 3258018 | - | 118 | 37678184 | VVr020 | - | 5S ribosomal RNA |
3258139 | 3261026 | - | 2888 | 37678184 | VVr021 | - | 23S ribosomal RNA |
3261303 | 3261378 | - | 76 | 37678184 | VVt096 | - | 13 Val tRNA |
3261407 | 3261482 | - | 76 | 37678184 | VVt097 | - | 10 Lys tRNA |
3261484 | 3261559 | - | 76 | 37678184 | VVt098 | - | 04 Glu tRNA |
3261628 | 3263162 | - | 1535 | 37678184 | VVr022 | - | 16S ribosomal RNA |
3299776 | 3299852 | - | 77 | 37678184 | VVt099 | - | 06 Asp tRNA |
3299884 | 3300001 | - | 118 | 37678184 | VVr023 | - | 5S ribosomal RNA |
3300125 | 3303012 | - | 2888 | 37678184 | VVr024 | - | 23S ribosomal RNA |
3303289 | 3303364 | - | 76 | 37678184 | VVt100 | - | 04 Glu tRNA |
3303433 | 3304967 | - | 1535 | 37678184 | VVr025 | - | 16S ribosomal RNA |