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   LOCUS       NC_005072            1657990 bp    DNA     circular BCT 21-NOV-2006
   DEFINITION  Prochlorococcus marinus subsp. pastoris str. CCMP1986, complete
               genome.
   ACCESSION   NC_005072
   VERSION     NC_005072.1  GI:33860560
   KEYWORDS    complete genome.
   SOURCE      Prochlorococcus marinus subsp. pastoris str. CCMP1986
               (Prochlorococcus marinus MED4)
     ORGANISM  Prochlorococcus marinus subsp. pastoris str. CCMP1986
               Bacteria; Cyanobacteria; Prochlorales; Prochlorococcaceae;
               Prochlorococcus.
   REFERENCE   1  (bases 1 to 1657990)
     AUTHORS   Rocap,G., Larimer,F.W., Lamerdin,J., Malfatti,S., Chain,P.,
               Ahlgren,N.A., Arellano,A., Coleman,M., Hauser,L., Hess,W.R.,
               Johnson,Z.I., Land,M., Lindell,D., Post,A.F., Regala,W., Shah,M.,
               Shaw,S.L., Steglich,C., Sullivan,M.B., Ting,C.S., Tolonen,A.,
               Webb,E.A., Zinser,E.R. and Chisholm,S.W.
     TITLE     Genome divergence in two Prochlorococcus ecotypes reflects oceanic
               niche differentiation
     JOURNAL   Nature 424 (6952), 1042-1047 (2003)
      PUBMED   12917642
   REFERENCE   2  (bases 1 to 1657990)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (19-AUG-2003) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 1657990)
     AUTHORS   Larimer,F. and Rocap,G.
     CONSRTM   Prochlorococcus genome consortium
     TITLE     Direct Submission
     JOURNAL   Submitted (03-JUL-2003) Submitted on behalf of the Prochlorococcus
               genome consortium, the DOE Joint Genome Institute, Production
               Genomics Facility, 2800 Mitchell Drive, Walnut Creek, CA 94598,
               USA, and the Genome Analysis Group, Oak Ridge National Laboratory,
               1060 Commerce Park Drive, Oak Ridge, TN 37831, USA;
               larimerfw@ornl.gov
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from BX548174.
               COMPLETENESS: full length.


Расположение РНК

Начало Конец Направление Длина PID Ген COG Комментарий
56335 56592 - 258 33860560 RNA_43 - tmRNA, 10Sa RNA, SsrA (presursor permuted)
65454 65535 - 82 33860560 RNA_37 - 15 Leu tRNA
122896 122967 + 72 33860560 RNA_1 - 07 Asn tRNA
229473 229554 + 82 33860560 RNA_2 - 15 Leu tRNA
249345 249418 - 74 33860560 RNA_36 - 11 Arg tRNA
264442 264517 - 76 33860560 RNA_35 - 16 Met tRNA
296377 296452 - 76 33860560 RNA_34 - 17 Phe tRNA
305096 305167 - 72 33860560 RNA_33 - 12 Thr tRNA
313061 318126 + 5066 33860560 RNA_38 - rRNA operon
313061 314525 + 1465 33860560 RNA_39 - 16S ribosomal RNA
314649 314722 + 74 33860560 RNA_3 - 14 Ile tRNA
314735 314807 + 73 33860560 RNA_4 - 02 Ala tRNA
315074 317948 + 2875 33860560 RNA_40 - 23S ribosomal RNA
318012 318126 + 115 33860560 RNA_41 - 5S ribosomal RNA
368348 368419 - 72 33860560 RNA_32 - 12 Thr tRNA
368430 368511 - 82 33860560 RNA_31 - 18 Tyr tRNA
450064 450137 - 74 33860560 RNA_30 - 06 Asp tRNA
450520 450592 - 73 33860560 RNA_29 - 20 Trp tRNA
538180 538265 + 86 33860560 RNA_5 - 15 Leu tRNA
625757 625846 - 90 33860560 RNA_28 - 08 Ser tRNA
776396 776472 - 77 33860560 RNA_27 - 16 Met tRNA
818172 818243 + 72 33860560 RNA_6 - 12 Thr tRNA
819740 819813 - 74 33860560 RNA_26 - 16 Met tRNA
861144 861230 - 87 33860560 RNA_25 - 08 Ser tRNA
914442 914515 + 74 33860560 RNA_7 - 03 Pro tRNA
1020083 1020155 - 73 33860560 RNA_24 - 04 Glu tRNA
1063867 1063938 + 72 33860560 RNA_8 - 10 Lys tRNA
1071431 1071504 + 74 33860560 RNA_9 - 03 Pro tRNA
1115986 1116070 - 85 33860560 RNA_23 - 08 Ser tRNA
1143410 1143483 + 74 33860560 RNA_10 - 11 Arg tRNA
1208565 1208637 - 73 33860560 RNA_22 - 02 Ala tRNA
1252993 1253074 + 82 33860560 RNA_11 - 15 Leu tRNA
1258262 1258334 + 73 33860560 RNA_12 - 09 His tRNA
1263327 1263426 - 100 33860560 RNA_44 - signal recognition particle RNA (4.5 S RNA)
1274670 1274740 - 71 33860560 RNA_21 - 01 Gly tRNA
1306262 1306333 + 72 33860560 RNA_13 - 13 Val tRNA
1469551 1469639 - 89 33860560 RNA_20 - 08 Ser tRNA
1489483 1489554 + 72 33860560 RNA_14 - 05 Gln tRNA
1502203 1502276 + 74 33860560 RNA_15 - 11 Arg tRNA
1516866 1516936 + 71 33860560 RNA_16 - 19 Cys tRNA
1533818 1533891 - 74 33860560 RNA_19 - 11 Arg tRNA
1533930 1534303 + 374 33860560 RNA_42 - bacterial ribonuclease P RNA component of ribozyme
1570753 1570824 - 72 33860560 RNA_18 - 01 Gly tRNA
1617346 1617417 - 72 33860560 RNA_17 - 13 Val tRNA
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