LOCUS NC_004556 2519802 bp DNA circular BCT 03-APR-2006 DEFINITION Xylella fastidiosa Temecula1, complete genome. ACCESSION NC_004556 VERSION NC_004556.1 GI:28197945 KEYWORDS . SOURCE Xylella fastidiosa Temecula1 ORGANISM Xylella fastidiosa Temecula1 Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella. REFERENCE 1 (bases 1 to 2519802) AUTHORS Van Sluys,M.A., de Oliveira,M.C., Monteiro-Vitorello,C.B., Miyaki,C.Y., Furlan,L.R., Camargo,L.E.A., da Silva,A.C.R., Moon,D.H., Takita,M.A., Lemos,E.G.M., Machado,M.A., Ferro,M.I.T., da Silva,F.R., Goldman,M.H.S., Goldman,G.H., Lemos,M.V.F., El-Dorry,H., Tsai,S.M., Carrer,H., Carraro,D.M., de Oliveira,R.C., Nunes,L.R., Siqueira,W.J., Coutinho,L.L., Kimura,E.T., Ferro,E.S., Harakava,R., Kuramae,E.E., Marino,C.L., Giglioti,E., Abreu,I.L., Alves,L.M.C., do Amaral,A.M., Baia,G.S., Blanco,S.R., Brito,M.S., Cannavan,F.S., Celestino,A.V., da Cunha,A.F., Fenille,R.C., Ferro,J.A., Formighieri,E.F., Kishi,L.T., Leoni,S.G., Oliveira,A.R., Rosa,V.E. Jr., Sassaki,F.T., Sena,J.A.D., de Souza,A.A., Truffi,D., Tsukumo,F., Yanai,G.M., Zaros,L.G., Civerolo,E.L., Simpson,A.J.G., Almeida,N.F. Jr., Setubal,J.C. and Kitajima,J.P. TITLE Comparative Analyses of the Complete Genome Sequences of Pierce's Disease and Citrus Variegated Chlorosis Strains of Xylella fastidiosa JOURNAL J. Bacteriol. 185 (3), 1018-1026 (2003) PUBMED 12533478 REFERENCE 2 (bases 1 to 2519802) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (10-SEP-2004) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2519802) AUTHORS Van Sluys,M.A., de Oliveira,M.C., Monteiro-Vitorello,C.B., Miyaki,C.Y., Furlan,L.R., Camargo,L.E.A., da Silva,A.C.R., Moon,D.H., Takita,M.A., Lemos,E.G.M., Machado,M.A., Ferro,M.I.T., da Silva,F.R., Goldman,M.H.S., Goldman,G.H., Lemos,M.V.F., El-Dorry,H., Tsai,S.M., Carrer,H., Carraro,D.M., de Oliveira,R.C., Nunes,L.R., Siqueira,W.J., Coutinho,L.L., Kimura,E.T., Ferro,E.S., Harakava,R., Kuramae,E.E., Marino,C.L., Giglioti,E., Abreu,I.L., Alves,L.M.C., do Amaral,A.M., Baia,G.S., Blanco,S.R., Brito,M.S., Cannavan,F.S., Celestino,A.V., da Cunha,A.F., Fenille,R.C., Ferro,J.A., Formighieri,E.F., Kishi,L.T., Leoni,S.G., Oliveira,A.R., Rosa,V.E. Jr., Sassaki,F.T., Sena,J.A.D., de Souza,A.A., Truffi,D., Tsukumo,F., Yanai,G.M., Zaros,L.G., Civerolo,E.L., Simpson,A.J.G., Almeida,N.F. Jr., Setubal,J.C. and Kitajima,J.P. TITLE Direct Submission JOURNAL Submitted (17-DEC-2001) Instituto de Biociencias, Universidade de Sao Paulo, Rua do Matao, 277, Sao Paulo, SP 05508-900, Brazil COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AE009442. COMPLETENESS: full length.
Расположение РНК[]
Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|
20728 | 20804 | - | 77 | 28197945 | PD0016 | - | 16 Met tRNA |
61898 | 61974 | + | 77 | 28197945 | PD0047 | - | 11 Arg tRNA |
66041 | 67585 | + | 1545 | 28197945 | PD0048 | - | 16S ribosomal RNA |
67692 | 67767 | + | 76 | 28197945 | PD0049 | - | 02 Ala tRNA |
67781 | 67857 | + | 77 | 28197945 | PD0050 | - | 14 Ile tRNA |
68050 | 70932 | + | 2883 | 28197945 | PD0051 | - | 23S ribosomal RNA |
71060 | 71177 | + | 118 | 28197945 | PD0052 | - | 5S ribosomal RNA |
122451 | 122543 | + | 93 | 28197945 | PD0096 | - | 08 Ser tRNA |
171124 | 172668 | + | 1545 | 28197945 | PD0133 | - | 16S ribosomal RNA |
172775 | 172850 | + | 76 | 28197945 | PD0134 | - | 02 Ala tRNA |
172864 | 172940 | + | 77 | 28197945 | PD0135 | - | 14 Ile tRNA |
173133 | 176015 | + | 2883 | 28197945 | PD0136 | - | 23S ribosomal RNA |
176143 | 176260 | + | 118 | 28197945 | PD0137 | - | 5S ribosomal RNA |
223170 | 223245 | - | 76 | 28197945 | PD0176 | - | 02 Ala tRNA |
234764 | 234838 | - | 75 | 28197945 | PD0184 | - | 04 Glu tRNA |
241438 | 241514 | + | 77 | 28197945 | PD0191 | - | 16 Met tRNA |
307078 | 307153 | + | 76 | 28197945 | PD0237 | - | 17 Phe tRNA |
317497 | 317581 | + | 85 | 28197945 | PD0247 | - | 15 Leu tRNA |
428976 | 429328 | + | 353 | 28197945 | PD0335 | - | ribonuclease P catalytic RNA subunit |
431180 | 431266 | - | 87 | 28197945 | PD0339 | - | 15 Leu tRNA |
431397 | 431472 | - | 76 | 28197945 | PD0340 | - | 04 Glu tRNA |
431526 | 431601 | - | 76 | 28197945 | PD0341 | - | 02 Ala tRNA |
506192 | 506276 | - | 85 | 28197945 | PD0411 | - | 15 Leu tRNA |
558291 | 558377 | - | 87 | 28197945 | PD0467 | - | 15 Leu tRNA |
562814 | 562897 | - | 84 | 28197945 | PD0470 | - | 15 Leu tRNA |
569915 | 569989 | + | 75 | 28197945 | PD0476 | - | 13 Val tRNA |
570020 | 570096 | + | 77 | 28197945 | PD0477 | - | 06 Asp tRNA |
617865 | 617940 | - | 76 | 28197945 | PD0510 | - | 10 Lys tRNA |
952980 | 953053 | - | 74 | 28197945 | PD0771 | - | 19 Cys tRNA |
1142563 | 1142638 | - | 76 | 28197945 | PD0944 | - | 10 Lys tRNA |
1263216 | 1263308 | + | 93 | 28197945 | PD1060 | - | 08 Ser tRNA |
1275932 | 1276007 | + | 76 | 28197945 | PD1074 | - | 12 Thr tRNA |
1279785 | 1279860 | - | 76 | 28197945 | PD1079 | - | 01 Gly tRNA |
1287099 | 1287175 | - | 77 | 28197945 | PD1085 | - | 11 Arg tRNA |
1417227 | 1417317 | - | 91 | 28197945 | PD1215 | - | 08 Ser tRNA |
1556021 | 1556096 | + | 76 | 28197945 | PD1327 | - | 01 Gly tRNA |
1670103 | 1670178 | - | 76 | 28197945 | PD1433 | - | 12 Thr tRNA |
1738190 | 1738264 | - | 75 | 28197945 | PD1496 | - | 13 Val tRNA |
1772646 | 1772735 | + | 90 | 28197945 | PD1526 | - | 08 Ser tRNA |
1860993 | 1861069 | - | 77 | 28197945 | PD1609 | - | 07 Asn tRNA |
1944465 | 1944541 | + | 77 | 28197945 | PD1675 | - | 16 Met tRNA |
1944587 | 1944661 | + | 75 | 28197945 | PD1676 | - | 05 Gln tRNA |
2020428 | 2020502 | - | 75 | 28197945 | PD1733 | - | 13 Val tRNA |
2124945 | 2125021 | + | 77 | 28197945 | PD1821 | - | 03 Pro tRNA |
2210084 | 2210157 | + | 74 | 28197945 | PD1880 | - | 01 Gly tRNA |
2239487 | 2239563 | - | 77 | 28197945 | PD1908 | - | 03 Pro tRNA |
2303865 | 2303942 | + | 78 | 28197945 | PD1961 | - | 11 Arg tRNA |
2368420 | 2368495 | - | 76 | 28197945 | PD2008 | - | 20 Trp tRNA |
2369847 | 2369922 | - | 76 | 28197945 | PD2010 | - | 12 Thr tRNA |
2369965 | 2370038 | - | 74 | 28197945 | PD2011 | - | 01 Gly tRNA |
2370072 | 2370157 | - | 86 | 28197945 | PD2012 | - | 18 Tyr tRNA |
2373906 | 2373982 | - | 77 | 28197945 | PD2017 | - | 05 Gln tRNA |
2447459 | 2447813 | + | 355 | 28197945 | PD2067 | - | tmRNA |
2489453 | 2489529 | + | 77 | 28197945 | PD2099 | - | 03 Pro tRNA |
2489593 | 2489671 | + | 79 | 28197945 | PD2100 | - | 11 Arg tRNA |
2489711 | 2489787 | + | 77 | 28197945 | PD2101 | - | 09 His tRNA |
2489898 | 2489973 | + | 76 | 28197945 | PD2102 | - | 10 Lys tRNA |