LOCUS NC_003228 5205140 bp DNA circular BCT 03-DEC-2005 DEFINITION Bacteroides fragilis NCTC 9343, complete genome. ACCESSION NC_003228 VERSION NC_003228.3 GI:60679597 KEYWORDS complete genome. SOURCE Bacteroides fragilis NCTC 9343 ORGANISM Bacteroides fragilis NCTC 9343 Bacteria; Bacteroidetes; Bacteroidetes (class); Bacteroidales; Bacteroidaceae; Bacteroides. REFERENCE 1 (bases 1 to 5205140) AUTHORS Cerdeno-Tarraga,A.M., Patrick,S., Crossman,L.C., Blakely,G., Abratt,V., Lennard,N., Poxton,I., Duerden,B., Harris,B., Quail,M.A., Barron,A., Clark,L., Corton,C., Doggett,J., Holden,M.T., Larke,N., Line,A., Lord,A., Norbertczak,H., Ormond,D., Price,C., Rabbinowitsch,E., Woodward,J., Barrell,B. and Parkhill,J. TITLE Extensive DNA inversions in the B. fragilis genome control variable gene expression JOURNAL Science 307 (5714), 1463-1465 (2005) PUBMED 15746427 REFERENCE 2 (bases 1 to 5205140) AUTHORS Cerdeno-Tarraga,A.M. TITLE Direct Submission JOURNAL Submitted (29-JUL-2004) Pathogen Sequencing Unit, Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, United Kingdom REFERENCE 3 (bases 1 to 5205140) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-APR-2002) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CR626927. On Mar 10, 2005 this sequence version replaced gi:27532922. COMPLETENESS: full length.
Расположение РНК[]
Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|
79576 | 79646 | + | 71 | 60679597 | BFt01 | - | 05 Gln tRNA |
276306 | 276380 | - | 75 | 60679597 | BFt02 | - | 04 Glu tRNA |
419981 | 420065 | - | 85 | 60679597 | BFt03 | - | 15 Leu tRNA |
537974 | 538046 | + | 73 | 60679597 | BFt04 | - | 01 Gly tRNA |
538061 | 538144 | + | 84 | 60679597 | BFt05 | - | 15 Leu tRNA |
561887 | 561959 | - | 73 | 60679597 | BFt06 | - | 03 Pro tRNA |
561972 | 562044 | - | 73 | 60679597 | BFt07 | - | 17 Phe tRNA |
643369 | 643445 | - | 77 | 60679597 | BFt08 | - | 16 Met tRNA |
698177 | 698249 | - | 73 | 60679597 | BFt09 | - | 10 Lys tRNA |
815932 | 816009 | - | 78 | 60679597 | BFt10 | - | 03 Pro tRNA |
860622 | 860695 | + | 74 | 60679597 | BFt11 | - | 05 Gln tRNA |
1096605 | 1096680 | - | 76 | 60679597 | BFt12 | - | 01 Gly tRNA |
1096686 | 1096771 | - | 86 | 60679597 | BFt13 | - | 18 Tyr tRNA |
1412164 | 1412240 | + | 77 | 60679597 | BFt14 | - | 12 Thr tRNA |
1482663 | 1482747 | + | 85 | 60679597 | BFt15 | - | 08 Ser tRNA |
1588839 | 1588923 | + | 85 | 60679597 | BFt16 | - | 08 Ser tRNA |
1623835 | 1623906 | + | 72 | 60679597 | BFt17 | - | 19 Cys tRNA |
1645741 | 1645817 | - | 77 | 60679597 | BFt18 | - | 12 Thr tRNA |
1987251 | 1987323 | - | 73 | 60679597 | BFt19 | - | 12 Thr tRNA |
2194242 | 2194328 | + | 87 | 60679597 | BFt20 | - | 08 Ser tRNA |
2194407 | 2194481 | + | 75 | 60679597 | BFt21 | - | 04 Glu tRNA |
2385065 | 2385137 | - | 73 | 60679597 | BFt22 | - | 10 Lys tRNA |
2466259 | 2466335 | + | 77 | 60679597 | BFt23 | - | 06 Asp tRNA |
2677212 | 2677288 | + | 77 | 60679597 | BFt24 | - | 11 Arg tRNA |
2722442 | 2722554 | + | 113 | 60679597 | BFr01 | - | |
2774863 | 2774938 | - | 76 | 60679597 | BFt25 | - | 10 Lys tRNA |
2778225 | 2778300 | - | 76 | 60679597 | BFt26 | - | 10 Lys tRNA |
2837475 | 2837552 | - | 78 | 60679597 | BFt27 | - | 03 Pro tRNA |
2837587 | 2837664 | - | 78 | 60679597 | BFt28 | - | 03 Pro tRNA |
2891405 | 2891481 | - | 77 | 60679597 | BFt29 | - | 11 Arg tRNA |
2891504 | 2891577 | - | 74 | 60679597 | BFt30 | - | 11 Arg tRNA |
2891596 | 2891669 | - | 74 | 60679597 | BFt31 | - | 11 Arg tRNA |
2932390 | 2932465 | - | 76 | 60679597 | BFt32 | - | 01 Gly tRNA |
2977816 | 2977888 | - | 73 | 60679597 | BFt33 | - | 01 Gly tRNA |
2977893 | 2977977 | - | 85 | 60679597 | BFt34 | - | 15 Leu tRNA |
2978039 | 2978114 | - | 76 | 60679597 | BFt35 | - | 01 Gly tRNA |
2978137 | 2978220 | - | 84 | 60679597 | BFt36 | - | 15 Leu tRNA |
2978255 | 2978339 | - | 85 | 60679597 | BFt37 | - | 15 Leu tRNA |
2978365 | 2978437 | - | 73 | 60679597 | BFt38 | - | 01 Gly tRNA |
3201914 | 3202064 | - | 151 | 60679597 | BFr02 | - | |
3202227 | 3205053 | - | 2827 | 60679597 | BFr03 | - | |
3205200 | 3205273 | - | 74 | 60679597 | BFt39 | - | 02 Ala tRNA |
3205302 | 3205378 | - | 77 | 60679597 | BFt40 | - | 14 Ile tRNA |
3205531 | 3207063 | - | 1533 | 60679597 | BFr04 | - | |
3354845 | 3354918 | + | 74 | 60679597 | BFt41 | - | 06 Asp tRNA |
3354949 | 3355025 | + | 77 | 60679597 | BFt42 | - | 06 Asp tRNA |
3562730 | 3562805 | + | 76 | 60679597 | BFt43 | - | 09 His tRNA |
3621322 | 3621395 | + | 74 | 60679597 | BFt44 | - | 02 Ala tRNA |
3851053 | 3851203 | - | 151 | 60679597 | BFr05 | - | |
3851366 | 3854192 | - | 2827 | 60679597 | BFr06 | - | |
3854339 | 3854412 | - | 74 | 60679597 | BFt45 | - | 02 Ala tRNA |
3854441 | 3854517 | - | 77 | 60679597 | BFt46 | - | 14 Ile tRNA |
3854670 | 3856202 | - | 1533 | 60679597 | BFr07 | - | |
3863283 | 3863355 | + | 73 | 60679597 | BFt47 | - | 17 Phe tRNA |
3999770 | 3999842 | + | 73 | 60679597 | BFt48 | - | 20 Trp tRNA |
4155363 | 4155450 | - | 88 | 60679597 | BFt49 | - | 08 Ser tRNA |
4256296 | 4256370 | - | 75 | 60679597 | BFt50 | - | 11 Arg tRNA |
4410250 | 4410400 | - | 151 | 60679597 | BFr08 | - | |
4410563 | 4413388 | - | 2826 | 60679597 | BFr09 | - | |
4413535 | 4413608 | - | 74 | 60679597 | BFt51 | - | 02 Ala tRNA |
4413637 | 4413713 | - | 77 | 60679597 | BFt52 | - | 14 Ile tRNA |
4413866 | 4415398 | - | 1533 | 60679597 | BFr10 | - | |
4476507 | 4476581 | - | 75 | 60679597 | BFt53 | - | 13 Val tRNA |
4476633 | 4476707 | - | 75 | 60679597 | BFt54 | - | 13 Val tRNA |
4476734 | 4476811 | - | 78 | 60679597 | BFt55 | - | 13 Val tRNA |
4596726 | 4596876 | - | 151 | 60679597 | BFr11 | - | |
4597039 | 4599864 | - | 2826 | 60679597 | BFr12 | - | |
4600011 | 4600084 | - | 74 | 60679597 | BFt56 | - | 02 Ala tRNA |
4600113 | 4600189 | - | 77 | 60679597 | BFt57 | - | 14 Ile tRNA |
4600342 | 4601874 | - | 1533 | 60679597 | BFr13 | - | |
4639785 | 4639860 | + | 76 | 60679597 | BFt58 | - | 16 Met tRNA |
4654651 | 4654801 | - | 151 | 60679597 | BFr14 | - | |
4654964 | 4657789 | - | 2826 | 60679597 | BFr15 | - | |
4657936 | 4658009 | - | 74 | 60679597 | BFt59 | - | 02 Ala tRNA |
4658038 | 4658114 | - | 77 | 60679597 | BFt60 | - | 14 Ile tRNA |
4658273 | 4659805 | - | 1533 | 60679597 | BFr16 | - | |
4725373 | 4725448 | - | 76 | 60679597 | BFt61 | - | 20 Trp tRNA |
4726737 | 4726808 | - | 72 | 60679597 | BFt62 | - | 12 Thr tRNA |
4726819 | 4726891 | - | 73 | 60679597 | BFt63 | - | 01 Gly tRNA |
4726920 | 4727005 | - | 86 | 60679597 | BFt64 | - | 18 Tyr tRNA |
4727077 | 4727153 | - | 77 | 60679597 | BFt65 | - | 12 Thr tRNA |
4742264 | 4742354 | + | 91 | 60679597 | BFt66 | - | |
4852871 | 4852954 | - | 84 | 60679597 | BFt67 | - | 15 Leu tRNA |
4923439 | 4923512 | + | 74 | 60679597 | BFt68 | - | 07 Asn tRNA |
4923542 | 4923618 | + | 77 | 60679597 | BFt69 | - | 07 Asn tRNA |
5013908 | 5013982 | - | 75 | 60679597 | BFt70 | - | 11 Arg tRNA |
5117302 | 5117375 | + | 74 | 60679597 | BFt71 | - | 16 Met tRNA |
5124805 | 5124955 | - | 151 | 60679597 | BFr17 | - | |
5125118 | 5127943 | - | 2826 | 60679597 | BFr18 | - | |
5128090 | 5128163 | - | 74 | 60679597 | BFt72 | - | 02 Ala tRNA |
5128192 | 5128268 | - | 77 | 60679597 | BFt73 | - | 14 Ile tRNA |
5128421 | 5129953 | - | 1533 | 60679597 | BFr19 | - |