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   LOCUS       NC_001471                254 bp ss-RNA     linear   VRL 10-JUL-2008
   DEFINITION  Coconut tinangaja viroid, complete genome.
   ACCESSION   NC_001471
   VERSION     NC_001471.1  GI:11496572
   DBLINK      Project:14662
   KEYWORDS    .
   SOURCE      Coconut tinangaja viroid
     ORGANISM  Coconut tinangaja viroid
               Viroids; Pospiviroidae; Cocadviroid.
   REFERENCE   1  (bases 1 to 254)
     AUTHORS   Keese,P., Osorio-Keese,M.E. and Symons,R.H.
     TITLE     Coconut tinangaja viroid: sequence homology with coconut
               cadang-cadang viroid and other potato spindle tuber viroid related
               RNAs
     JOURNAL   Virology 162 (2), 508-510 (1988)
      PUBMED   3341120
   REFERENCE   2  (bases 1 to 254)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (01-DEC-2000) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from M20731.
               Draft entry and computer readable copy of sequence [1] kindly
               provided by R.H.Symons (09/22/88).
               COMPLETENESS: full length.
   FEATURES             Location/Qualifiers
        source          1..254
                        /organism="Coconut tinangaja viroid"
                        /mol_type="genomic RNA"
                        /db_xref="taxon:12889"
        misc_feature    1..17
                        /note="T domain"
        misc_feature    18..41
                        /note="P domain"
        misc_feature    42..86
                        /note="C domain"
        misc_feature    87..107
                        /note="V domain"
        misc_feature    108..148
                        /note="T2 domain"
        variation       117
                        /note="t in one variant; a in another"
        variation       121
                        /note="t in one variant; c in another"
        misc_feature    149..166
                        /note="V domain"
        misc_feature    167..216
                        /note="C domain"
        misc_feature    217..239
                        /note="P domain"
        misc_feature    240..254
                        /note="T domain"
   ORIGIN      
           1 ctggggaatt cccacggctc ggcaaaataa aagcacaaga gcgactgcta gagggatccc
          61 cggggaaacc cctagcaacc gaggtaggga gcgtacctgg tgtcgccgat tcgtgctggt
         121 tgggcttcgt cccttccgag cttcgatccg acgcccggcc gcttcctcgc cgaagctgct
         181 acggagacta cccggtggat acaactcttt gcagcgccct gtgtaataaa agctcgagtc
         241 cggtttgcgc ccct
   //

Связь с бактериями[]

  • NC_008061 - (107783-144) Phosphoglycerate mutase (фосфоглицератмутаза) [1]
{000000000000000000000000100011001000000000}
  • NC_008543 - (23770678+144) Phosphoglycerate mutase
[000000000000000000000000100011001000000000]
  • NC_006624 - (716530+126) 2-oxoacid:ferredoxin oxidoreductase, alpha subunit
[000000000000000000000111000000000000000000]
  • NC_007484 - (2485962-54) MscS Mechanosensitive ion channel [2]
{000000000111000000000000000000000000000000}


Actino[]

{000000000000000111000000000000000000000000}
  • NC_009664 - (201590+102) TRAP dicarboxylate transporter, DctM subunit
[000000000000000001001100000000001000000000]
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